Perry, L. L., N.G. Bright, R. J. Carroll, J. Patrick, and B. M. Applegate. Vibrio fischeri strain ATCC 49387, utilized in the Microtox assay, lacks a functional LuxI and utilizes the product of AinS for autoinduction of bioluminescence. In preperation.

Han, Y., B. M. Applegate, R. H. Linton, and P. E. Nelson. 2002. Decontamination of Bacillus thuringiensis spores on selected surfaces by chlorine dioxide gas. Journal of Public Health. In review.

Han, Y., B. M. Applegate, R. H. Linton, and P. E. Nelson. 2002. Decontamination of Bacillus thuringiensis spores on selected surfaces by chlorine dioxide gas. Journal of Public Health. In review.

Mioni, C. E., A. M. Howard, J. M. DeBruyn, N. G. Bright, M. R. Twiss, B. M. Applegate and S.W. Wilhelm. 2002. Characterization and preliminary field trials of a bioluminescent bacterial reporter of iron bioavailability. Ocean Chemistry. In review.

Applegate, B.M. Jr., N. G. Bright, R. J. Carroll, L. J. Mauer, B. M. Applegate Sr. 2002. Evaluation of preservatives for value added food products using bioluminescence.
Proceedings of the 12th International Symposium on Bioluminescence & Chemiluminescence. In Press

Shingleton, J.T., B. M. Applegate, A. J. Baker, G. S. Sayler, and P. Bienkowski. 2001. Quantification of toluene dioxygenase induction and kinetic modeling of TCE cometabolism by Pseudomonas putida TVA8. Biotechnology and Bioengineering. 76:341-350.

Simpson, M. L., G. S. Sayler, J. T. Flemming and B. M. Applegate. 2001. Whole-cell biocomputing. Trends in Biotechnology. 19(8):317-323.

Simpson, M. L., G. S. Sayler, G. Patterson, D. E. Nivens, E. K. Bolton, J. M. Rochelle, J. C. Arnott, B. M. Applegate, S. Ripp and M. A. Guillorn. 2001. An integrated CMOS microluminometer for low-level luminescence sensing in the bioluminescent bioreporter integrated circuit. Sensors and Actuators B. 72:134-140.

Ripp, S. A., B. M. Applegate, M. L. Simpson and G. S. Sayler. 2001. Whole-cell bioluminescent bioreporter sensing of foodborne toxicants. In Photonic Detection and Intervention Technologies for Safe Food. Proceedings of SPIE Vol. 4206 p13-21.

Hay, A. G., J. F. Rice, B. M. Applegate, N. G. Bright and G. S. Sayler. 2000. A Bioluminescent whole-cell reporter for detection of 2,4-dichlorophenoxyacetic acid and 2,4-dichlorophenol in soil. Applied and Environmental Microbiology. 66(10):4589-4594.

LeBlond, J. D., B. M. Applegate, F.-M. Menn, T. W. Schultz and G. S. Sayler. 2000. Structure-toxicity assessment of metabolites of the aerobic bacterial transformation of substituted naphthalenes. Environmental Toxicology and Chemistry. Vol. 19, No. 5, p. 1235-1246.

Ripp, S., B. M. Applegate, D. E. Nivens, M. J. Paulus, G. E. Jellison, M. L. Simpson and G. S. Sayler. 2000. Whole-cell environmental monitoring devices: bioluminescent bioreporter integrated circuits. (Mulchandi and Sadik, eds.) In: ACS Symposium Series No. 762/Chemical and Biological Sensors for Environmental Monitoring. p. 197-205.

Simpson, M. L., M. J. Paulus, G. E. Jellison, G. S. Sayler, B. M. Applegate, S. Ripp and D. E. Nivens.1999. Bioluminescent bioreporter integrated circuits (bbics): whole-cell environmental monitoring devices. Proceedings of the 29th International Conference on Environmental Systems (Society of Automotive Engineers), Denver, CO.

Sayler, G. S., S. Ripp, D. E. Nivens, B. M. Applegate and M. L. Simpson. Bioluminescent bioreporters: moving toward smart systems in bioremediation process monitoring and control. Proceedings of the 1st Arab Environmental Biotechnology Conference, Abu Dhabi, March 1999.

Applegate, B .M., J. Shingleton, S. Ripp, N. Bright, D. Nivens, M. Simpson and G. S. Sayler. 1999. Bioluminescent bioreporter integrated circuits (BBICs) for the detection of toluene and trichloroethylene (TCE) in aqueous solutions. In: Bioluminescence and Chemiluminescence: Perspectives for the 21st Century, eds. A. Roda, M. Pazzagli, L.J. Kricka and P.E. Stanley. p. 589-592.

Palmer, R. J., B. M. Applegate, R. Burlage, G. S. Sayler and D. C. White. 1999. Heterogeneity of gene expression and activity in bacterial biofilms. In: Bioluminescence and Chemiluminescence: Perspectives for the 21st Century, eds. A. Roda, M. Pazzagli, L.J. Kricka and P.E. Stanley. p.609-612.

Shingleton, J. T., B. M. Applegate, A. C. Nagel, P. R. Bienkowski and G. S. Sayler. 1998. Induction of the tod operon by trichloroethylene in Pseudomonas putida TVA8. Applied and Environmental Microbiology. 64: 5049-5052.

Simpson, M. L., G. S. Sayler, B. M. Applegate, S. Ripp, D. E. Nivens, M. J. Paulus and G. E. Jellison Jr. 1998. Bioluminescent bioreporter integrated circuits: novel whole-cell biosensors. Trends in Biotechnology. 16: 332-338.

Applegate, B. M., S. R. Kehrmeyer and G. S. Sayler. 1998. A chromosomally based
tod-luxCDABE whole-cell bioluminescent reporter for benzene, toluene, ethylbenzene and xylene (BTEX) sensing. Applied and Environmental Microbiology. 64: 2730-2735.

Heitzer, A., B. M. Applegate, S. R. Kehrmeyer, H. C. Pinkart, O. F. Webb, T. J. Phelps, G.S. Sayler and D.C. White. 1998. Physiological considerations of environmental applications of lux reporter fusions. Journal of Microbiological Methods. 33: 45-58.

Simpson, M. L., Pualus, G. Jellison, G. S. Sayler, B. M. Applegate, S. Ripp and D. E. Nivens, 1998 Bioluminescent bioreporter integrated circuits (bbics): whole cell chemical sensors. Technical Digest of 1998 Solid-State Sensors and Actuators Conference, Hilton Head Isl., SC, p 354-357.

Pieters, J. G., J. Sanseverino, C. L. Wright, C. L. Cheng, K. Liu, K. G. Robinson, C. D. Cox, S. R. Kehrmeyer, B. M. Applegate and G. S. Sayler. 1997. Bioluminescence and cometabolic degradation of toluene and trichloroethylene by Pseudomonas putida TVA8. Proceedings of 52nd Purdue Ind. Waste Conf. West Lafayette, IN.

Applegate, B. M., C. Kelly, L. Lackey, J. McPherson, S. R. Kehrmeyer, F. Menn and G. Sayler. 1997. A bioluminescent reporter for toluene biotransformation and the co-oxidation of trichloroethylene (TCE) by the toluene dioxygenase in Pseudomonas putida F1. Journal of Industrial Microbiology 18:4-9.

Kehrmeyer, S. R., B. M. Applegate, H. C. Pinkart, D. B. Hedrick, D. C. White and G. S. Sayler. 1996. Combined lipid/DNA extraction method for environmental samples. Journal of Microbiological Methods 25:153-163.

Applegate, B. M., U. Matrubutam, J. Sanseverino and G. S. Sayler. 1995. Biodegradation genes as marker genes in microbial esosystems. In: (A.D.L. Akerman, J.D. Van Elsas and F.J. de Bruijn, eds.) Molecular Microbial Ecology Manual. Kluwer, Netherlands. 6.1.8:1-14.

Sayler, G. S., U. Matrubutham, C. Steward, A. Layton, C. Lajoie, J. Easter and B. M. Applegate. 1995. Towards field release of engineered strains for bioremediation. Proceedings of the 7th Symposium on Environmental Releases of Biotechnology Products: Risk Assessment Methods and Research Progress. ORD/U.S. Environmental Protection Agency, Gulf Breeze, FL.

Sanseverino, J., J. T. Fleming, A. Heitzer, B. M. Applegate and G. S. Sayler. 1994. Applications of environmental biotechnology to bioremediation. p 97-125 in Remediation of Hazardous Waste Contaminated Soils. D.L. Wise and D.J. Trantolo, editors.

Strong-Gunderson, J. M., B. Applegate, G. S. Sayler and A. V. Palumbo. 1993. Biosurfactants and increased bioavailability of sorbed organic contaminants: measurements using a biosensor. Proceedings of the IGT Symposium on Gas, Oil and Environmental Biotechnology. Nov 29 - Dec 1. Colorado Springs, CO.

Sanseverino, J., B. M. Applegate, J. M. H. King and G. S. Sayler. 1993. Plasmid-mediated mineralization of naphthalene, phenanthrene and anthracene. Applied and Environmental Microbiology. 59: 1931-1947.

Menn, F. M., Applegate B. M. and G. S. Sayler. 1993. NAH plasmid mediated catabolism of anthracene and phenanthrene to naphthoic acids. Applied and Environmental Microbiology. 59: 1938-1942.

Sanseverino, J., C. Werner, J. Fleming, B. M. Applegate, J. M. H. King and G. S. Sayler. 1993. Molecular diagnostics of polycyclic aromatic hydrocarbon biodegradation in manufactured gas plant soils. Biodegradation. 4: 303-321.

Sayler, G. S., J. T. Fleming, B. M. Applegate and C. Werner. 1992. Nucleic acid extraction and analysis: detecting genes and their activity in the environment. In: Genetic Interactions between Microorganisms in the Natural Environment. eds. E.M. Wellington and J.D. Van Elsas, p 237-255.

DiGrazia, P. M., J. M. H. King, J. W. Blackburn, B. M. Applegate, P. R. Bienkowski, B. L. Hilton and G. S. Sayler. 1991. Dynamic systems analysis of naphthalene biodegradation in a continuous soil slurry reactor. Biodegradation. 2: 81-91.

Webb, O. F., T. J. Phelps, P. R. Bienkowski, P. M. DiGrazia, G. D. Reed, B. M. Applegate, D. C. White and G. S. Sayler. 1991. Development of a differential volume reactor system for soil biodegradation studies. Applied Biochemistry and Biotechnology. 28/29: 5-19.

King, J. M. H., P. M. DiGrazia, B. M. Applegate, R. Burlage, J. Sanseverino, P. Dunbar, F. Larimer and G. S. Sayler 1990. Rapid, sensitive bioluminescent reporter technology for naphthalene exposure and biodegradation. Science. 249: 778 - 781.v

Sayler, G. S., J. Fleming, B. M. Applegate, C. Werner and K. Nikbakht. 1989. Microbial community analysis using environmental nucleic acid extracts. In: Recent advances in microbial ecology, eds. T. Hattori, Y. Ishida, Y. Maruyama, R.Y. Morita and A. Uchida. Japan Scientific Societies Press.